WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C05D11.6c.1 Sequence Name  C05D11.6c.1
Length (nt)  1454   Chromosome Location  III: 6411578-6415656
Chromosome . Primary Identifier  III Chromosome Location . Start  6411578
Chromosome Location . End  6415656 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C05D11.6c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003523 nas-4 C05D11.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C05D11.6c C05D11.6c 1059   III: 6411816-6411932

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C05D11.6c.1 6411578 6415656 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon92203   355   III: 6411578-6411932 Caenorhabditis elegans
Exon92209   153   III: 6412769-6412921 Caenorhabditis elegans
Exon92213   187   III: 6412970-6413156 Caenorhabditis elegans
Exon92217   105   III: 6413536-6413640 Caenorhabditis elegans
Exon92221   192   III: 6413685-6413876 Caenorhabditis elegans
Exon92225   127   III: 6414038-6414164 Caenorhabditis elegans
Exon92229   94   III: 6414209-6414302 Caenorhabditis elegans
Exon92232   90   III: 6414870-6414959 Caenorhabditis elegans
Exon92235   90   III: 6415007-6415096 Caenorhabditis elegans
Exon92237   61   III: 6415596-6415656 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C05D11.6c.1 6411578 6415656 -1

1 Sequence

Length
1454

1 Sequence Ontology Term

Identifier Name Description
transcript