WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T26A5.5c Sequence Name  T26A5.5c
Length (nt)  1692   Chromosome Location  III: 6457446-6457460
Chromosome . Primary Identifier  III Chromosome Location . Start  6457446
Chromosome Location . End  6457460
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T26A5.5c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE50145 JHDM-1, isoform c 63.7 563 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00007358
WBRNAi00007660
WBRNAi00019240
WBRNAi00087727
WBRNAi00035980
WBRNAi00091523
WBRNAi00064106

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T26A5.5c 6457446 6457460 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020821 jhdm-1 T26A5.5 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:T26A5.5c 6457446 6457460 1
CDS:T26A5.5c 6457525 6458301 1
CDS:T26A5.5c 6458353 6458545 1
CDS:T26A5.5c 6458602 6459011 1
CDS:T26A5.5c 6459060 6459271 1
CDS:T26A5.5c 6459320 6459404 1

1 Sequence

Length
1692

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T26A5.5c.1 T26A5.5c.1 1692   III: 6457446-6459404