WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K03F8.2.1 Sequence Name  K03F8.2.1
Length (nt)  2059   Chromosome Location  III: 6509445-6514773
Chromosome . Primary Identifier  III Chromosome Location . Start  6509445
Chromosome Location . End  6514773 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K03F8.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000044 acr-5 K03F8.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K03F8.2 K03F8.2 1797   III: 6509699-6509849

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K03F8.2.1 6509445 6514773 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon92563   405   III: 6509445-6509849 Caenorhabditis elegans
Exon92564   92   III: 6510275-6510366 Caenorhabditis elegans
Exon92565   123   III: 6510800-6510922 Caenorhabditis elegans
Exon92566   109   III: 6511043-6511151 Caenorhabditis elegans
Exon92568   157   III: 6512057-6512213 Caenorhabditis elegans
Exon92569   95   III: 6512268-6512362 Caenorhabditis elegans
Exon92570   278   III: 6512806-6513083 Caenorhabditis elegans
Exon92571   202   III: 6513264-6513465 Caenorhabditis elegans
Exon92572   155   III: 6513511-6513665 Caenorhabditis elegans
Exon92573   143   III: 6513756-6513898 Caenorhabditis elegans
Exon92576   84   III: 6514350-6514433 Caenorhabditis elegans
Exon92577   116   III: 6514484-6514599 Caenorhabditis elegans
Exon92578   100   III: 6514674-6514773 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K03F8.2.1 6509445 6514773 -1

1 Sequence

Length
2059

1 Sequence Ontology Term

Identifier Name Description
transcript