WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F27B3.2a.1 Sequence Name  F27B3.2a.1
Length (nt)  1981   Chromosome Location  III: 6581885-6586580
Chromosome . Primary Identifier  III Chromosome Location . Start  6581885
Chromosome Location . End  6586580 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F27B3.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000060 acr-21 F27B3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F27B3.2a F27B3.2a 1908   III: 6581927-6581969

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F27B3.2a.1 6581885 6586580 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon92758   85   III: 6581885-6581969 Caenorhabditis elegans
Exon92760   167   III: 6583461-6583627 Caenorhabditis elegans
Exon92764   155   III: 6583926-6584080 Caenorhabditis elegans
Exon92768   212   III: 6584129-6584340 Caenorhabditis elegans
Exon92772   146   III: 6584387-6584532 Caenorhabditis elegans
Exon92776   243   III: 6584705-6584947 Caenorhabditis elegans
Exon92780   144   III: 6584995-6585138 Caenorhabditis elegans
Exon92784   118   III: 6585183-6585300 Caenorhabditis elegans
Exon92788   158   III: 6585343-6585500 Caenorhabditis elegans
Exon92792   66   III: 6585565-6585630 Caenorhabditis elegans
Exon92794   351   III: 6585942-6586292 Caenorhabditis elegans
Exon92801   136   III: 6586445-6586580 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F27B3.2a.1 6581885 6586580 1

1 Sequence

Length
1981

1 Sequence Ontology Term

Identifier Name Description
transcript