WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F57B9.2c.1 Sequence Name  F57B9.2c.1
Length (nt)  7005   Chromosome Location  III: 6949584-6958192
Chromosome . Primary Identifier  III Chromosome Location . Start  6949584
Chromosome Location . End  6958192 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F57B9.2c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002845 let-711 F57B9.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F57B9.2c F57B9.2c 7005   III: 6949584-6949776

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F57B9.2c.1 6949584 6958192 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon93908   193   III: 6949584-6949776 Caenorhabditis elegans
Exon93911   91   III: 6949820-6949910 Caenorhabditis elegans
Exon93914   652   III: 6949959-6950610 Caenorhabditis elegans
Exon93917   438   III: 6950659-6951096 Caenorhabditis elegans
Exon93920   333   III: 6952072-6952404 Caenorhabditis elegans
Exon93924   189   III: 6952468-6952656 Caenorhabditis elegans
Exon93928   675   III: 6952741-6953415 Caenorhabditis elegans
Exon93932   1497   III: 6953470-6954966 Caenorhabditis elegans
Exon93936   1617   III: 6955046-6956662 Caenorhabditis elegans
Exon93940   916   III: 6956727-6957642 Caenorhabditis elegans
Exon93945   268   III: 6957690-6957957 Caenorhabditis elegans
Exon93949   136   III: 6958057-6958192 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F57B9.2c.1 6949584 6958192 1

1 Sequence

Length
7005

1 Sequence Ontology Term

Identifier Name Description
transcript