WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F11H8.2b.1 Sequence Name  F11H8.2b.1
Length (nt)  1700   Chromosome Location  III: 7009162-7019584
Chromosome . Primary Identifier  III Chromosome Location . Start  7009162
Chromosome Location . End  7019584 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F11H8.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017389 lgc-38 F11H8.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F11H8.2b F11H8.2b 1440   III: 7009241-7009300

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F11H8.2b.1 7009162 7019584 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon94108   139   III: 7009162-7009300 Caenorhabditis elegans
Exon94110   62   III: 7009585-7009646 Caenorhabditis elegans
Exon94113   95   III: 7014309-7014403 Caenorhabditis elegans
Exon94115   68   III: 7015076-7015143 Caenorhabditis elegans
Exon94117   264   III: 7015195-7015458 Caenorhabditis elegans
Exon94119   39   III: 7015865-7015903 Caenorhabditis elegans
Exon94121   204   III: 7016097-7016300 Caenorhabditis elegans
Exon94123   88   III: 7016475-7016562 Caenorhabditis elegans
Exon94125   114   III: 7016610-7016723 Caenorhabditis elegans
Exon94127   96   III: 7016778-7016873 Caenorhabditis elegans
Exon94128   57   III: 7016938-7016994 Caenorhabditis elegans
Exon94130   68   III: 7017357-7017424 Caenorhabditis elegans
Exon94132   141   III: 7019088-7019228 Caenorhabditis elegans
Exon94134   265   III: 7019320-7019584 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F11H8.2b.1 7009162 7019584 1

1 Sequence

Length
1700

1 Sequence Ontology Term

Identifier Name Description
transcript