WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0280.3.1 Sequence Name  B0280.3.1
Length (nt)  987   Chromosome Location  III: 7123128-7124332
Chromosome . Primary Identifier  III Chromosome Location . Start  7123128
Chromosome Location . End  7124332 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0280.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015101 rpia-1 B0280.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0280.3 B0280.3 756   III: 7123185-7123244

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0280.3.1 7123128 7124332 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon94362   117   III: 7123128-7123244 Caenorhabditis elegans
Exon94364   153   III: 7123292-7123444 Caenorhabditis elegans
Exon94366   243   III: 7123492-7123734 Caenorhabditis elegans
Exon94368   474   III: 7123859-7124332 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0280.3.1 7123128 7124332 1

1 Sequence

Length
987

1 Sequence Ontology Term

Identifier Name Description
transcript