WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0280.13.1 Sequence Name  B0280.13.1
Length (nt)  1915   Chromosome Location  III: 7128901-7132056
Chromosome . Primary Identifier  III Chromosome Location . Start  7128901
Chromosome Location . End  7132056 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0280.13.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015107 viro-2 B0280.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0280.13 B0280.13 1851   III: 7128908-7128988

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0280.13.1 7128901 7132056 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon94380   88   III: 7128901-7128988 Caenorhabditis elegans
Exon94381   93   III: 7129033-7129125 Caenorhabditis elegans
Exon94382   92   III: 7129373-7129464 Caenorhabditis elegans
Exon94383   134   III: 7129510-7129643 Caenorhabditis elegans
Exon94384   206   III: 7130036-7130241 Caenorhabditis elegans
Exon94385   144   III: 7130289-7130432 Caenorhabditis elegans
Exon94386   394   III: 7130528-7130921 Caenorhabditis elegans
Exon94387   512   III: 7131249-7131760 Caenorhabditis elegans
Exon94388   252   III: 7131805-7132056 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0280.13.1 7128901 7132056 1

1 Sequence

Length
1915

1 Sequence Ontology Term

Identifier Name Description
transcript