WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:B0280.1a Sequence Name  B0280.1a
Length (nt)  1008   Chromosome Location  III: 7133883-7133885
Chromosome . Primary Identifier  III Chromosome Location . Start  7133883
Chromosome Location . End  7133885
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0280.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE24762 GGTB-1, isoform a 37.2 335 Caenorhabditis elegans
 

Other

24 RNAi

WormBase ID
WBRNAi00038839
WBRNAi00038845
WBRNAi00099764
WBRNAi00100341
WBRNAi00085800
WBRNAi00028047
WBRNAi00022262
WBRNAi00090857
WBRNAi00005163
WBRNAi00005445
WBRNAi00007191
WBRNAi00061381
WBRNAi00100715
WBRNAi00099158
WBRNAi00099562
WBRNAi00099360
WBRNAi00038837
WBRNAi00038844
WBRNAi00091936
WBRNAi00099967
WBRNAi00100154
WBRNAi00100528
WBRNAi00100902
WBRNAi00116425

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:B0280.1a 7133883 7133885 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015099 ggtb-1 B0280.1 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:B0280.1a 7133883 7133885 1
CDS:B0280.1a 7133933 7134058 1
CDS:B0280.1a 7134113 7134187 1
CDS:B0280.1a 7134243 7134471 1
CDS:B0280.1a 7134524 7134799 1
CDS:B0280.1a 7134845 7135008 1
CDS:B0280.1a 7136274 7136408 1

1 Sequence

Length
1008

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:B0280.1a.1 B0280.1a.1 1242   III: 7133766-7136525