WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:B0280.1b Sequence Name  B0280.1b
Length (nt)  978   Chromosome Location  III: 7133883-7133885
Chromosome . Primary Identifier  III Chromosome Location . Start  7133883
Chromosome Location . End  7133885
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0280.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE00735 GGTB-1, isoform b 36.2 325 Caenorhabditis elegans
 

Other

20 RNAi

WormBase ID
WBRNAi00038845
WBRNAi00099764
WBRNAi00100341
WBRNAi00085800
WBRNAi00028047
WBRNAi00005163
WBRNAi00007191
WBRNAi00061381
WBRNAi00100715
WBRNAi00099158
WBRNAi00099562
WBRNAi00099360
WBRNAi00038837
WBRNAi00038844
WBRNAi00091936
WBRNAi00099967
WBRNAi00100154
WBRNAi00100528
WBRNAi00100902
WBRNAi00116425

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:B0280.1b 7133883 7133885 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015099 ggtb-1 B0280.1 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:B0280.1b 7133883 7133885 1
CDS:B0280.1b 7133933 7134058 1
CDS:B0280.1b 7134113 7134187 1
CDS:B0280.1b 7134243 7134471 1
CDS:B0280.1b 7134524 7134799 1
CDS:B0280.1b 7134845 7135113 1

1 Sequence

Length
978

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:B0280.1b.2 B0280.1b.2 2252   III: 7133799-7136458
Transcript:B0280.1b.1 B0280.1b.1 2412   III: 7133799-7136463