WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:K04G7.3a Sequence Name  K04G7.3a
Length (nt)  3456   Chromosome Location  III: 7146469-7146643
Chromosome . Primary Identifier  III Chromosome Location . Start  7146469
Chromosome Location . End  7146643
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K04G7.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE25042 OGT-1, isoform a 128.0 1151 Caenorhabditis elegans
 

Other

11 RNAi

WormBase ID
WBRNAi00110198
WBRNAi00091931
WBRNAi00067879
WBRNAi00067955
WBRNAi00049954
WBRNAi00049955
WBRNAi00016612
WBRNAi00005392
WBRNAi00005857
WBRNAi00091966
WBRNAi00033973

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:K04G7.3a 7146469 7146643 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003858 ogt-1 K04G7.3 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier
Start End Strand
CDS:K04G7.3a 7146469 7146643 -1
CDS:K04G7.3a 7146693 7146816 -1
CDS:K04G7.3a 7147452 7147569 -1
CDS:K04G7.3a 7147615 7147908 -1
CDS:K04G7.3a 7147965 7148795 -1
CDS:K04G7.3a 7148864 7149502 -1
CDS:K04G7.3a 7149748 7149892 -1
CDS:K04G7.3a 7149945 7150231 -1
CDS:K04G7.3a 7150282 7150594 -1
CDS:K04G7.3a 7150641 7150794 -1
CDS:K04G7.3a 7150846 7151017 -1
CDS:K04G7.3a 7153374 7153541 -1
CDS:K04G7.3a 7153735 7153770 -1

1 Sequence

Length
3456

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:K04G7.3a.1 K04G7.3a.1 4110   III: 7145842-7153797