WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R13A5.3.1 Sequence Name  R13A5.3.1
Length (nt)  593   Chromosome Location  III: 7566411-7567490
Chromosome . Primary Identifier  III Chromosome Location . Start  7566411
Chromosome Location . End  7567490 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R13A5.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020047 ttr-32 R13A5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R13A5.3 R13A5.3 420   III: 7566572-7566716

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R13A5.3.1 7566411 7567490 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon95438   111   III: 7566411-7566521 Caenorhabditis elegans
Exon95440   145   III: 7566572-7566716 Caenorhabditis elegans
Exon95441   74   III: 7566991-7567064 Caenorhabditis elegans
Exon95443   57   III: 7567174-7567230 Caenorhabditis elegans
Exon95445   206   III: 7567285-7567490 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R13A5.3.1 7566411 7567490 1

1 Sequence

Length
593

1 Sequence Ontology Term

Identifier Name Description
transcript