WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK112.2d.1 Sequence Name  ZK112.2d.1
Length (nt)  2904   Chromosome Location  III: 7727136-7736351
Chromosome . Primary Identifier  III Chromosome Location . Start  7727136
Chromosome Location . End  7736351 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK112.2d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003559 ncl-1 ZK112.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK112.2d ZK112.2d 2904   III: 7727136-7727283

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK112.2d.1 7727136 7736351 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon95914   148   III: 7727136-7727283 Caenorhabditis elegans
Exon95919   68   III: 7727770-7727837 Caenorhabditis elegans
Exon95929   149   III: 7731389-7731537 Caenorhabditis elegans
Exon95938   403   III: 7731589-7731991 Caenorhabditis elegans
Exon95950   369   III: 7732042-7732410 Caenorhabditis elegans
Exon95958   87   III: 7733031-7733117 Caenorhabditis elegans
Exon95968   147   III: 7733318-7733464 Caenorhabditis elegans
Exon95978   168   III: 7734649-7734816 Caenorhabditis elegans
Exon95988   900   III: 7734884-7735783 Caenorhabditis elegans
Exon95998   288   III: 7735832-7736119 Caenorhabditis elegans
Exon96006   177   III: 7736175-7736351 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK112.2d.1 7727136 7736351 1

1 Sequence

Length
2904

1 Sequence Ontology Term

Identifier Name Description
transcript