WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK112.7.1 Sequence Name  ZK112.7.1
Length (nt)  10252   Chromosome Location  III: 7741229-7754448
Chromosome . Primary Identifier  III Chromosome Location . Start  7741229
Chromosome Location . End  7754448 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK112.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000395 cdh-3 ZK112.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK112.7 ZK112.7 10086   III: 7741395-7741514

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK112.7.1 7741229 7754448 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon96022   286   III: 7741229-7741514 Caenorhabditis elegans
Exon96023   636   III: 7741577-7742212 Caenorhabditis elegans
Exon96024   1434   III: 7742503-7743936 Caenorhabditis elegans
Exon96025   175   III: 7744009-7744183 Caenorhabditis elegans
Exon96026   953   III: 7744230-7745182 Caenorhabditis elegans
Exon96027   138   III: 7745243-7745380 Caenorhabditis elegans
Exon96028   634   III: 7745428-7746061 Caenorhabditis elegans
Exon96029   880   III: 7746182-7747061 Caenorhabditis elegans
Exon96030   1209   III: 7747110-7748318 Caenorhabditis elegans
Exon96031   373   III: 7748478-7748850 Caenorhabditis elegans
Exon96033   529   III: 7749122-7749650 Caenorhabditis elegans
Exon96034   188   III: 7749706-7749893 Caenorhabditis elegans
Exon96035   677   III: 7749941-7750617 Caenorhabditis elegans
Exon96036   308   III: 7750665-7750972 Caenorhabditis elegans
Exon96037   367   III: 7751029-7751395 Caenorhabditis elegans
Exon96038   467   III: 7751445-7751911 Caenorhabditis elegans
Exon96039   137   III: 7752164-7752300 Caenorhabditis elegans
Exon96040   235   III: 7752442-7752676 Caenorhabditis elegans
Exon96041   260   III: 7753230-7753489 Caenorhabditis elegans
Exon96042   144   III: 7753586-7753729 Caenorhabditis elegans
Exon96043   107   III: 7753776-7753882 Caenorhabditis elegans
Exon96044   115   III: 7754334-7754448 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK112.7.1 7741229 7754448 -1

1 Sequence

Length
10252

1 Sequence Ontology Term

Identifier Name Description
transcript