WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C29E4.3b.1 Sequence Name  C29E4.3b.1
Length (nt)  3135   Chromosome Location  III: 7933825-7937701
Chromosome . Primary Identifier  III Chromosome Location . Start  7933825
Chromosome Location . End  7937701 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C29E4.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004303 ran-2 C29E4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C29E4.3b C29E4.3b 2781   III: 7933840-7933903

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C29E4.3b.1 7933825 7937701 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon96544   79   III: 7933825-7933903 Caenorhabditis elegans
Exon96546   279   III: 7933952-7934230 Caenorhabditis elegans
Exon96549   221   III: 7934276-7934496 Caenorhabditis elegans
Exon96552   362   III: 7934544-7934905 Caenorhabditis elegans
Exon96555   161   III: 7934964-7935124 Caenorhabditis elegans
Exon96558   701   III: 7935483-7936183 Caenorhabditis elegans
Exon96561   754   III: 7936227-7936980 Caenorhabditis elegans
Exon96564   104   III: 7937028-7937131 Caenorhabditis elegans
Exon96566   123   III: 7937181-7937303 Caenorhabditis elegans
Exon96569   351   III: 7937351-7937701 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C29E4.3b.1 7933825 7937701 1

1 Sequence

Length
3135

1 Sequence Ontology Term

Identifier Name Description
transcript