WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C06G4.2d Sequence Name  C06G4.2d
Length (nt)  2280   Chromosome Location  III: 7981169-7981270
Chromosome . Primary Identifier  III Chromosome Location . Start  7981169
Chromosome Location . End  7981270
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06G4.2d

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE30486 CLP-1, isoform d 80.4 759 Caenorhabditis elegans
 

Other

32 RNAi

WormBase ID
WBRNAi00086913
WBRNAi00086918
WBRNAi00086915
WBRNAi00086914
WBRNAi00086916
WBRNAi00086919
WBRNAi00086765
WBRNAi00039943
WBRNAi00039944
WBRNAi00109164
WBRNAi00010345
WBRNAi00005188
WBRNAi00005716
WBRNAi00022732
WBRNAi00022733
WBRNAi00022734
WBRNAi00022735
WBRNAi00109553
WBRNAi00028599
WBRNAi00091835
WBRNAi00086176
WBRNAi00086177
WBRNAi00091800
WBRNAi00109359
WBRNAi00091805
WBRNAi00091810
WBRNAi00091815
WBRNAi00091820
WBRNAi00091825
WBRNAi00091830

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C06G4.2d 7981169 7981270 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000542 clp-1 C06G4.2 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:C06G4.2d 7981169 7981270 1
CDS:C06G4.2d 7981365 7981488 1
CDS:C06G4.2d 7982464 7982538 1
CDS:C06G4.2d 7982731 7982859 1
CDS:C06G4.2d 7982907 7983349 1
CDS:C06G4.2d 7983392 7983550 1
CDS:C06G4.2d 7983621 7983883 1
CDS:C06G4.2d 7983944 7984075 1
CDS:C06G4.2d 7984450 7984919 1
CDS:C06G4.2d 7984964 7985069 1
CDS:C06G4.2d 7985118 7985175 1
CDS:C06G4.2d 7985665 7985754 1
CDS:C06G4.2d 7985801 7985919 1
CDS:C06G4.2d 7986023 7986032 1

1 Sequence

Length
2280

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C06G4.2d.1 C06G4.2d.1 2565   III: 7981169-7986317