WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K12H4.1.1 Sequence Name  K12H4.1.1
Length (nt)  2272   Chromosome Location  III: 8067289-8071463
Chromosome . Primary Identifier  III Chromosome Location . Start  8067289
Chromosome Location . End  8071463 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K12H4.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000448 pros-1 K12H4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K12H4.1 K12H4.1 1785   III: 8067338-8067396

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K12H4.1.1 8067289 8071463 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon96917   108   III: 8067289-8067396 Caenorhabditis elegans
Exon96918   151   III: 8067446-8067596 Caenorhabditis elegans
Exon96919   147   III: 8068114-8068260 Caenorhabditis elegans
Exon96920   220   III: 8068327-8068546 Caenorhabditis elegans
Exon96921   185   III: 8068900-8069084 Caenorhabditis elegans
Exon96922   223   III: 8069132-8069354 Caenorhabditis elegans
Exon96925   472   III: 8069516-8069987 Caenorhabditis elegans
Exon96926   145   III: 8070404-8070548 Caenorhabditis elegans
Exon96927   108   III: 8070595-8070702 Caenorhabditis elegans
Exon96928   513   III: 8070951-8071463 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K12H4.1.1 8067289 8071463 1

1 Sequence

Length
2272

1 Sequence Ontology Term

Identifier Name Description
transcript