WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C30A5.10a.1 Sequence Name  C30A5.10a.1
Length (nt)  3121   Chromosome Location  III: 8205124-8209868
Chromosome . Primary Identifier  III Chromosome Location . Start  8205124
Chromosome Location . End  8209868 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C30A5.10a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016242 C30A5.10 C30A5.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C30A5.10a C30A5.10a 2967   III: 8205256-8205272

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C30A5.10a.1 8205124 8209868 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon97253   149   III: 8205124-8205272 Caenorhabditis elegans
Exon97254   172   III: 8205342-8205513 Caenorhabditis elegans
Exon97255   92   III: 8205563-8205654 Caenorhabditis elegans
Exon97256   85   III: 8205740-8205824 Caenorhabditis elegans
Exon97257   215   III: 8205872-8206086 Caenorhabditis elegans
Exon97258   597   III: 8206188-8206784 Caenorhabditis elegans
Exon97260   153   III: 8207174-8207326 Caenorhabditis elegans
Exon97262   77   III: 8207375-8207451 Caenorhabditis elegans
Exon97264   164   III: 8207502-8207665 Caenorhabditis elegans
Exon97266   105   III: 8207732-8207836 Caenorhabditis elegans
Exon97267   88   III: 8207887-8207974 Caenorhabditis elegans
Exon97269   108   III: 8208119-8208226 Caenorhabditis elegans
Exon97271   116   III: 8208278-8208393 Caenorhabditis elegans
Exon97273   243   III: 8208474-8208716 Caenorhabditis elegans
Exon97275   72   III: 8208764-8208835 Caenorhabditis elegans
Exon97277   148   III: 8209110-8209257 Caenorhabditis elegans
Exon97279   537   III: 8209332-8209868 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C30A5.10a.1 8205124 8209868 -1

1 Sequence

Length
3121

1 Sequence Ontology Term

Identifier Name Description
transcript