WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C30A5.10b.1 Sequence Name  C30A5.10b.1
Length (nt)  2481   Chromosome Location  III: 8206188-8209875
Chromosome . Primary Identifier  III Chromosome Location . Start  8206188
Chromosome Location . End  8209875 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C30A5.10b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016242 C30A5.10 C30A5.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C30A5.10b C30A5.10b 1401   III: 8207726-8207836

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C30A5.10b.1 8206188 8209875 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon97259   597   III: 8206188-8206784 Caenorhabditis elegans
Exon97261   153   III: 8207174-8207326 Caenorhabditis elegans
Exon97263   77   III: 8207375-8207451 Caenorhabditis elegans
Exon97265   335   III: 8207502-8207836 Caenorhabditis elegans
Exon97268   88   III: 8207887-8207974 Caenorhabditis elegans
Exon97270   108   III: 8208119-8208226 Caenorhabditis elegans
Exon97272   116   III: 8208278-8208393 Caenorhabditis elegans
Exon97274   243   III: 8208474-8208716 Caenorhabditis elegans
Exon97276   72   III: 8208764-8208835 Caenorhabditis elegans
Exon97278   148   III: 8209110-8209257 Caenorhabditis elegans
Exon97280   544   III: 8209332-8209875 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C30A5.10b.1 8206188 8209875 -1

1 Sequence

Length
2481

1 Sequence Ontology Term

Identifier Name Description
transcript