WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC21.2b.1 Sequence Name  ZC21.2b.1
Length (nt)  3096   Chromosome Location  III: 8535920-8542651
Chromosome . Primary Identifier  III Chromosome Location . Start  8535920
Chromosome Location . End  8542651 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC21.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006614 trp-1 ZC21.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC21.2b ZC21.2b 3096   III: 8535920-8535945

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC21.2b.1 8535920 8542651 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon98155   26   III: 8535920-8535945 Caenorhabditis elegans
Exon98157   141   III: 8536347-8536487 Caenorhabditis elegans
Exon98159   58   III: 8536820-8536877 Caenorhabditis elegans
Exon98161   157   III: 8536925-8537081 Caenorhabditis elegans
Exon98163   214   III: 8537131-8537344 Caenorhabditis elegans
Exon98165   388   III: 8537401-8537788 Caenorhabditis elegans
Exon98167   150   III: 8537895-8538044 Caenorhabditis elegans
Exon98169   138   III: 8538089-8538226 Caenorhabditis elegans
Exon98171   197   III: 8538309-8538505 Caenorhabditis elegans
Exon98173   181   III: 8538550-8538730 Caenorhabditis elegans
Exon98175   570   III: 8538984-8539553 Caenorhabditis elegans
Exon98177   200   III: 8539724-8539923 Caenorhabditis elegans
Exon98179   222   III: 8541718-8541939 Caenorhabditis elegans
Exon98181   166   III: 8542066-8542231 Caenorhabditis elegans
Exon98183   131   III: 8542318-8542448 Caenorhabditis elegans
Exon98184   157   III: 8542495-8542651 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC21.2b.1 8535920 8542651 1

1 Sequence

Length
3096

1 Sequence Ontology Term

Identifier Name Description
transcript