WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Nc Primary Transcript :

WormMine ID  Transcript:F54F2.2d Sequence Name  F54F2.2d
Length (nt)  3894   Chromosome Location  III: 8792847-8806274
Chromosome . Primary Identifier  III Chromosome Location . Start  8792847
Chromosome Location . End  8806274 Method  non_coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54F2.2d

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006975 zfp-1 F54F2.2 Caenorhabditis elegans
 

Other

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F54F2.2d 8792847 8806274 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon98870   101   III: 8792847-8792947 Caenorhabditis elegans
Exon98874   178   III: 8792997-8793174 Caenorhabditis elegans
Exon98880   73   III: 8793217-8793289 Caenorhabditis elegans
Exon98886   89   III: 8793339-8793427 Caenorhabditis elegans
Exon98893   111   III: 8794033-8794143 Caenorhabditis elegans
Exon98904   67   III: 8798398-8798464 Caenorhabditis elegans
Exon98913   131   III: 8798533-8798663 Caenorhabditis elegans
Exon98921   256   III: 8798859-8799114 Caenorhabditis elegans
Exon98929   91   III: 8799395-8799485 Caenorhabditis elegans
Exon98938   111   III: 8799535-8799645 Caenorhabditis elegans
Exon98949   597   III: 8802825-8803421 Caenorhabditis elegans
Exon98959   544   III: 8803567-8804110 Caenorhabditis elegans
Exon98969   589   III: 8804284-8804872 Caenorhabditis elegans
Exon98979   133   III: 8804921-8805053 Caenorhabditis elegans
Exon98980   823   III: 8805452-8806274 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F54F2.2d 8792847 8806274 1

1 Sequence

Length
3894

1 Sequence Ontology Term

Identifier Name Description
transcript