WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F54G8.4b Sequence Name  F54G8.4b
Length (nt)  2775   Chromosome Location  III: 9147606-9147797
Chromosome . Primary Identifier  III Chromosome Location . Start  9147606
Chromosome Location . End  9147797
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54G8.4b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE51358 NHL-1, isoform b 103.2 924 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00048391
WBRNAi00048392
WBRNAi00015669
WBRNAi00007014
WBRNAi00065846
WBRNAi00032824
WBRNAi00076477
WBRNAi00065838

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F54G8.4b 9147606 9147797 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003597 nhl-1 F54G8.4 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier
Start End Strand
CDS:F54G8.4b 9147606 9147797 -1
CDS:F54G8.4b 9147844 9147978 -1
CDS:F54G8.4b 9148025 9148150 -1
CDS:F54G8.4b 9148442 9148926 -1
CDS:F54G8.4b 9149077 9149771 -1
CDS:F54G8.4b 9150403 9150537 -1
CDS:F54G8.4b 9150591 9150715 -1
CDS:F54G8.4b 9150767 9150850 -1
CDS:F54G8.4b 9150929 9151088 -1
CDS:F54G8.4b 9151135 9151478 -1
CDS:F54G8.4b 9151524 9151665 -1
CDS:F54G8.4b 9153220 9153329 -1
CDS:F54G8.4b 9153763 9153804 -1

1 Sequence

Length
2775

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F54G8.4b.1 F54G8.4b.1 3091   III: 9147395-9153909