WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC84.3.1 Sequence Name  ZC84.3.1
Length (nt)  3110   Chromosome Location  III: 9186558-9191109
Chromosome . Primary Identifier  III Chromosome Location . Start  9186558
Chromosome Location . End  9191109 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC84.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013847 cls-3 ZC84.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC84.3 ZC84.3 2952   III: 9186684-9186743

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC84.3.1 9186558 9191109 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon99876   186   III: 9186558-9186743 Caenorhabditis elegans
Exon99877   120   III: 9186793-9186912 Caenorhabditis elegans
Exon99878   564   III: 9186964-9187527 Caenorhabditis elegans
Exon99879   214   III: 9187982-9188195 Caenorhabditis elegans
Exon99880   287   III: 9188283-9188569 Caenorhabditis elegans
Exon99881   234   III: 9188647-9188880 Caenorhabditis elegans
Exon99882   79   III: 9188934-9189012 Caenorhabditis elegans
Exon99883   517   III: 9189066-9189582 Caenorhabditis elegans
Exon99884   277   III: 9189630-9189906 Caenorhabditis elegans
Exon99885   129   III: 9189955-9190083 Caenorhabditis elegans
Exon99886   384   III: 9190132-9190515 Caenorhabditis elegans
Exon99887   119   III: 9190991-9191109 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC84.3.1 9186558 9191109 -1

1 Sequence

Length
3110

1 Sequence Ontology Term

Identifier Name Description
transcript