WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T23G5.2a.1 Sequence Name  T23G5.2a.1
Length (nt)  2484   Chromosome Location  III: 9231421-9236322
Chromosome . Primary Identifier  III Chromosome Location . Start  9231421
Chromosome Location . End  9236322 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T23G5.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011962 T23G5.2 T23G5.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T23G5.2a T23G5.2a 2160   III: 9231738-9231834

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T23G5.2a.1 9231421 9236322 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon99957   414   III: 9231421-9231834 Caenorhabditis elegans
Exon99958   149   III: 9232184-9232332 Caenorhabditis elegans
Exon99959   201   III: 9232381-9232581 Caenorhabditis elegans
Exon99960   339   III: 9232635-9232973 Caenorhabditis elegans
Exon99961   561   III: 9233022-9233582 Caenorhabditis elegans
Exon99962   110   III: 9234206-9234315 Caenorhabditis elegans
Exon99964   126   III: 9235035-9235160 Caenorhabditis elegans
Exon99965   232   III: 9235265-9235496 Caenorhabditis elegans
Exon99967   282   III: 9235920-9236201 Caenorhabditis elegans
Exon99969   70   III: 9236253-9236322 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T23G5.2a.1 9231421 9236322 -1

1 Sequence

Length
2484

1 Sequence Ontology Term

Identifier Name Description
transcript