WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:K04H4.2b Sequence Name  K04H4.2b
Length (nt)  2367   Chromosome Location  III: 9348186-9348259
Chromosome . Primary Identifier  III Chromosome Location . Start  9348186
Chromosome Location . End  9348259
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K04H4.2b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE36653 CHTB-1, isoform b 80.4 788 Caenorhabditis elegans
 

Other

18 RNAi

WormBase ID
WBRNAi00066104
WBRNAi00049959
WBRNAi00025876
WBRNAi00027400
WBRNAi00016613
WBRNAi00005990
WBRNAi00098192
WBRNAi00084985
WBRNAi00033975
WBRNAi00074515
WBRNAi00074514
WBRNAi00074516
WBRNAi00074518
WBRNAi00072564
WBRNAi00074513
WBRNAi00074517
WBRNAi00074519
WBRNAi00094887

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:K04H4.2b 9348186 9348259 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010573 chtb-1 K04H4.2 Caenorhabditis elegans

15 Locations


Feature . Primary Identifier
Start End Strand
CDS:K04H4.2b 9348186 9348259 -1
CDS:K04H4.2b 9348483 9348623 -1
CDS:K04H4.2b 9348677 9348868 -1
CDS:K04H4.2b 9348924 9349070 -1
CDS:K04H4.2b 9349170 9349373 -1
CDS:K04H4.2b 9349452 9350135 -1
CDS:K04H4.2b 9350182 9350298 -1
CDS:K04H4.2b 9350353 9350481 -1
CDS:K04H4.2b 9350530 9350589 -1
CDS:K04H4.2b 9351241 9351366 -1
CDS:K04H4.2b 9353527 9353624 -1
CDS:K04H4.2b 9353669 9353771 -1
CDS:K04H4.2b 9354663 9354802 -1
CDS:K04H4.2b 9354850 9354967 -1
CDS:K04H4.2b 9355312 9355345 -1

1 Sequence

Length
2367

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:K04H4.2b.1 K04H4.2b.1 2902   III: 9347768-9355462