WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C38C10.4.1 Sequence Name  C38C10.4.1
Length (nt)  1680   Chromosome Location  III: 9391330-9393164
Chromosome . Primary Identifier  III Chromosome Location . Start  9391330
Chromosome Location . End  9393164 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C38C10.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001689 gpr-2 C38C10.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C38C10.4 C38C10.4 1578   III: 9391409-9391629

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C38C10.4.1 9391330 9393164 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon100305   300   III: 9391330-9391629 Caenorhabditis elegans
Exon100306   608   III: 9391682-9392289 Caenorhabditis elegans
Exon100307   501   III: 9392340-9392840 Caenorhabditis elegans
Exon100308   271   III: 9392894-9393164 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C38C10.4.1 9391330 9393164 -1

1 Sequence

Length
1680

1 Sequence Ontology Term

Identifier Name Description
transcript