WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54C8.3.1 Sequence Name  F54C8.3.1
Length (nt)  3243   Chromosome Location  III: 9435507-9441460
Chromosome . Primary Identifier  III Chromosome Location . Start  9435507
Chromosome Location . End  9441460 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54C8.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001284 emb-30 F54C8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54C8.3 F54C8.3 3084   III: 9435664-9436107

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F54C8.3.1 9435507 9441460 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon100367   601   III: 9435507-9436107 Caenorhabditis elegans
Exon100368   72   III: 9436156-9436227 Caenorhabditis elegans
Exon100369   114   III: 9436428-9436541 Caenorhabditis elegans
Exon100370   139   III: 9436591-9436729 Caenorhabditis elegans
Exon100371   213   III: 9436786-9436998 Caenorhabditis elegans
Exon100372   360   III: 9437047-9437406 Caenorhabditis elegans
Exon100373   185   III: 9437788-9437972 Caenorhabditis elegans
Exon100374   115   III: 9438019-9438133 Caenorhabditis elegans
Exon100375   255   III: 9438195-9438449 Caenorhabditis elegans
Exon100376   252   III: 9438809-9439060 Caenorhabditis elegans
Exon100377   413   III: 9439119-9439531 Caenorhabditis elegans
Exon100379   95   III: 9439762-9439856 Caenorhabditis elegans
Exon100386   95   III: 9440943-9441037 Caenorhabditis elegans
Exon100387   164   III: 9441082-9441245 Caenorhabditis elegans
Exon100388   170   III: 9441291-9441460 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F54C8.3.1 9435507 9441460 -1

1 Sequence

Length
3243

1 Sequence Ontology Term

Identifier Name Description
transcript