WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F54C8.6a Sequence Name  F54C8.6a
Length (nt)  912   Chromosome Location  III: 9444409-9444600
Chromosome . Primary Identifier  III Chromosome Location . Start  9444409
Chromosome Location . End  9444600
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54C8.6a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE44342 F54C8.6, isoform a 34.0 303 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00048265
WBRNAi00015588
WBRNAi00006349
WBRNAi00032758

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F54C8.6a 9444409 9444600 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010039 F54C8.6 F54C8.6 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:F54C8.6a 9444409 9444600 -1
CDS:F54C8.6a 9444926 9445014 -1
CDS:F54C8.6a 9445062 9445291 -1
CDS:F54C8.6a 9446088 9446344 -1
CDS:F54C8.6a 9446537 9446604 -1
CDS:F54C8.6a 9448256 9448331 -1

1 Sequence

Length
912

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F54C8.6a.1 F54C8.6a.1 1633   III: 9443816-9449871
Transcript:F54C8.6a.2 F54C8.6a.2 1512   III: 9443816-9448338