WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F55H2.1a.2 Sequence Name  F55H2.1a.2
Length (nt)  868   Chromosome Location  III: 9498158-9500375
Chromosome . Primary Identifier  III Chromosome Location . Start  9498158
Chromosome Location . End  9500375 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55H2.1a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004933 sod-4 F55H2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55H2.1a F55H2.1a 531   III: 9498360-9498370

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F55H2.1a.2 9498158 9500375 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon100595   213   III: 9498158-9498370 Caenorhabditis elegans
Exon100598   82   III: 9498449-9498530 Caenorhabditis elegans
Exon100602   96   III: 9498907-9499002 Caenorhabditis elegans
Exon100606   180   III: 9499328-9499507 Caenorhabditis elegans
Exon100610   101   III: 9499554-9499654 Caenorhabditis elegans
Exon100614   66   III: 9500137-9500202 Caenorhabditis elegans
Exon100618   130   III: 9500246-9500375 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F55H2.1a.2 9498158 9500375 -1

1 Sequence

Length
868

1 Sequence Ontology Term

Identifier Name Description
transcript