WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:ZK1098.1b Sequence Name  ZK1098.1b
Length (nt)  1242   Chromosome Location  III: 9523954-9524061
Chromosome . Primary Identifier  III Chromosome Location . Start  9523954
Chromosome Location . End  9524061
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1098.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE46142 PRP-40, isoform b 49.4 413 Caenorhabditis elegans
 

Other

13 RNAi

WormBase ID
WBRNAi00002116
WBRNAi00059106
WBRNAi00000675
WBRNAi00083832
WBRNAi00080030
WBRNAi00021802
WBRNAi00007173
WBRNAi00038143
WBRNAi00111706
WBRNAi00002634
WBRNAi00059103
WBRNAi00080118
WBRNAi00075864

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:ZK1098.1b 9523954 9524061 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014218 prp-40 ZK1098.1 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:ZK1098.1b 9523954 9524061 1
CDS:ZK1098.1b 9524108 9524282 1
CDS:ZK1098.1b 9524330 9525093 1
CDS:ZK1098.1b 9525150 9525344 1

1 Sequence

Length
1242

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:ZK1098.1b.1 ZK1098.1b.1 1242   III: 9523954-9525344