WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1098.5.1 Sequence Name  ZK1098.5.1
Length (nt)  621   Chromosome Location  III: 9525552-9527083
Chromosome . Primary Identifier  III Chromosome Location . Start  9525552
Chromosome Location . End  9527083 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1098.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014222 trpp-3 ZK1098.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1098.5 ZK1098.5 546   III: 9525552-9525593

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1098.5.1 9525552 9527083 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon100669   42   III: 9525552-9525593 Caenorhabditis elegans
Exon100670   99   III: 9525642-9525740 Caenorhabditis elegans
Exon100671   216   III: 9526560-9526775 Caenorhabditis elegans
Exon100672   264   III: 9526820-9527083 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1098.5.1 9525552 9527083 1

1 Sequence

Length
621

1 Sequence Ontology Term

Identifier Name Description
transcript