WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1098.10e.1 Sequence Name  ZK1098.10e.1
Length (nt)  4047   Chromosome Location  III: 9546295-9556526
Chromosome . Primary Identifier  III Chromosome Location . Start  9546295
Chromosome Location . End  9556526 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1098.10e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006755 unc-16 ZK1098.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1098.10e ZK1098.10e 3573   III: 9546359-9546424

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1098.10e.1 9546295 9556526 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

21 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon100718   130   III: 9546295-9546424 Caenorhabditis elegans
Exon100727   129   III: 9546671-9546799 Caenorhabditis elegans
Exon100738   280   III: 9547380-9547659 Caenorhabditis elegans
Exon100749   181   III: 9547751-9547931 Caenorhabditis elegans
Exon100761   122   III: 9548566-9548687 Caenorhabditis elegans
Exon100774   169   III: 9549172-9549340 Caenorhabditis elegans
Exon100787   44   III: 9549414-9549457 Caenorhabditis elegans
Exon100803   99   III: 9550137-9550235 Caenorhabditis elegans
Exon100822   254   III: 9550721-9550974 Caenorhabditis elegans
Exon100837   197   III: 9551189-9551385 Caenorhabditis elegans
Exon100852   114   III: 9551439-9551552 Caenorhabditis elegans
Exon100874   331   III: 9552582-9552912 Caenorhabditis elegans
Exon100885   400   III: 9553226-9553625 Caenorhabditis elegans
Exon100895   48   III: 9553676-9553723 Caenorhabditis elegans
Exon100907   148   III: 9554443-9554590 Caenorhabditis elegans
Exon100917   81   III: 9554638-9554718 Caenorhabditis elegans
Exon100927   68   III: 9554769-9554836 Caenorhabditis elegans
Exon100937   149   III: 9555122-9555270 Caenorhabditis elegans
Exon100947   286   III: 9555328-9555613 Caenorhabditis elegans
Exon100957   300   III: 9555664-9555963 Caenorhabditis elegans
Exon100969   517   III: 9556010-9556526 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1098.10e.1 9546295 9556526 1

1 Sequence

Length
4047

1 Sequence Ontology Term

Identifier Name Description
transcript