WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C48B4.4c.1 Sequence Name  C48B4.4c.1
Length (nt)  5115   Chromosome Location  III: 9570688-9579120
Chromosome . Primary Identifier  III Chromosome Location . Start  9570688
Chromosome Location . End  9579120 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C48B4.4c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000421 ced-7 C48B4.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C48B4.4c C48B4.4c 5115   III: 9570688-9570882

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C48B4.4c.1 9570688 9579120 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon101022   195   III: 9570688-9570882 Caenorhabditis elegans
Exon101027   861   III: 9571423-9572283 Caenorhabditis elegans
Exon101032   255   III: 9572331-9572585 Caenorhabditis elegans
Exon101037   199   III: 9572639-9572837 Caenorhabditis elegans
Exon101042   260   III: 9572885-9573144 Caenorhabditis elegans
Exon101047   189   III: 9573224-9573412 Caenorhabditis elegans
Exon101052   185   III: 9573465-9573649 Caenorhabditis elegans
Exon101057   458   III: 9573696-9574153 Caenorhabditis elegans
Exon101063   992   III: 9575861-9576852 Caenorhabditis elegans
Exon101064   93   III: 9576941-9577033 Caenorhabditis elegans
Exon101072   970   III: 9577137-9578106 Caenorhabditis elegans
Exon101077   177   III: 9578445-9578621 Caenorhabditis elegans
Exon101082   146   III: 9578674-9578819 Caenorhabditis elegans
Exon101084   135   III: 9578986-9579120 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C48B4.4c.1 9570688 9579120 -1

1 Sequence

Length
5115

1 Sequence Ontology Term

Identifier Name Description
transcript