WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C07A9.3b Sequence Name  C07A9.3b
Length (nt)  2898   Chromosome Location  III: 9699994-9700119
Chromosome . Primary Identifier  III Chromosome Location . Start  9699994
Chromosome Location . End  9700119
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C07A9.3b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE36354 TLK-1, isoform b 109.3 965 Caenorhabditis elegans
 

Other

25 RNAi

WormBase ID
WBRNAi00085261
WBRNAi00085266
WBRNAi00085268
WBRNAi00085267
WBRNAi00039975
WBRNAi00099770
WBRNAi00100349
WBRNAi00066671
WBRNAi00006024
WBRNAi00100723
WBRNAi00099164
WBRNAi00099568
WBRNAi00099366
WBRNAi00085259
WBRNAi00024496
WBRNAi00008359
WBRNAi00099975
WBRNAi00100162
WBRNAi00086516
WBRNAi00086518
WBRNAi00085262
WBRNAi00085264
WBRNAi00082241
WBRNAi00100536
WBRNAi00100910

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C07A9.3b 9699994 9700119 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006579 tlk-1 C07A9.3 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:C07A9.3b 9699994 9700119 1
CDS:C07A9.3b 9704867 9704971 1
CDS:C07A9.3b 9705614 9705934 1
CDS:C07A9.3b 9705985 9706208 1
CDS:C07A9.3b 9706718 9707198 1
CDS:C07A9.3b 9707258 9708688 1
CDS:C07A9.3b 9708739 9708849 1
CDS:C07A9.3b 9709315 9709338 1
CDS:C07A9.3b 9709797 9709871 1

1 Sequence

Length
2898

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C07A9.3b.1 C07A9.3b.1 3295   III: 9699994-9710268