WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C07A9.4.1 Sequence Name  C07A9.4.1
Length (nt)  1866   Chromosome Location  III: 9710240-9713949
Chromosome . Primary Identifier  III Chromosome Location . Start  9710240
Chromosome Location . End  9713949 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C07A9.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003571 ncx-6 C07A9.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C07A9.4 C07A9.4 1773   III: 9710312-9710430

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C07A9.4.1 9710240 9713949 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon101377   191   III: 9710240-9710430 Caenorhabditis elegans
Exon101378   70   III: 9710481-9710550 Caenorhabditis elegans
Exon101379   62   III: 9710601-9710662 Caenorhabditis elegans
Exon101380   238   III: 9711034-9711271 Caenorhabditis elegans
Exon101381   125   III: 9711315-9711439 Caenorhabditis elegans
Exon101382   118   III: 9711486-9711603 Caenorhabditis elegans
Exon101383   338   III: 9712042-9712379 Caenorhabditis elegans
Exon101384   103   III: 9712428-9712530 Caenorhabditis elegans
Exon101385   180   III: 9712581-9712760 Caenorhabditis elegans
Exon101386   233   III: 9712947-9713179 Caenorhabditis elegans
Exon101387   208   III: 9713742-9713949 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C07A9.4.1 9710240 9713949 -1

1 Sequence

Length
1866

1 Sequence Ontology Term

Identifier Name Description
transcript