WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R10E11.1b Sequence Name  R10E11.1b
Length (nt)  6054   Chromosome Location  III: 9766698-9766737
Chromosome . Primary Identifier  III Chromosome Location . Start  9766698
Chromosome Location . End  9766737
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R10E11.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE46860 CBP-1, isoform b 222.4 2017 Caenorhabditis elegans
 

Other

128 RNAi

WormBase ID
WBRNAi00084535
WBRNAi00084536
WBRNAi00084538
WBRNAi00106747
WBRNAi00097500
WBRNAi00051692
WBRNAi00084541
WBRNAi00084539
WBRNAi00084540
WBRNAi00066910
WBRNAi00085498
WBRNAi00051693
WBRNAi00009058
WBRNAi00091049
WBRNAi00006037
WBRNAi00007168
WBRNAi00082115
WBRNAi00082119
WBRNAi00082121
WBRNAi00082120
WBRNAi00082126
WBRNAi00034814
WBRNAi00113350
WBRNAi00101707
WBRNAi00084642
WBRNAi00026076
WBRNAi00082125
WBRNAi00084533
WBRNAi00084532
WBRNAi00065751

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R10E11.1b 9766698 9766737 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000366 cbp-1 R10E11.1 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:R10E11.1b 9766698 9766737 1
CDS:R10E11.1b 9766791 9766867 1
CDS:R10E11.1b 9766920 9767708 1
CDS:R10E11.1b 9768003 9768368 1
CDS:R10E11.1b 9768421 9768547 1
CDS:R10E11.1b 9768680 9768829 1
CDS:R10E11.1b 9768881 9769393 1
CDS:R10E11.1b 9769444 9772656 1
CDS:R10E11.1b 9772708 9772915 1
CDS:R10E11.1b 9772966 9773158 1
CDS:R10E11.1b 9773331 9773633 1
CDS:R10E11.1b 9773862 9773936 1

1 Sequence

Length
6054

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R10E11.1b.1 R10E11.1b.1 7131   III: 9766510-9774825