WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1128.5.1 Sequence Name  ZK1128.5.1
Length (nt)  1547   Chromosome Location  III: 10120781-10122925
Chromosome . Primary Identifier  III Chromosome Location . Start  10120781
Chromosome Location . End  10122925 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1128.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044072 ham-3 ZK1128.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1128.5 ZK1128.5 1341   III: 10120783-10120836

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1128.5.1 10120781 10122925 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon102558   56   III: 10120781-10120836 Caenorhabditis elegans
Exon102559   132   III: 10120886-10121017 Caenorhabditis elegans
Exon102560   252   III: 10121076-10121327 Caenorhabditis elegans
Exon102561   532   III: 10121380-10121911 Caenorhabditis elegans
Exon102562   301   III: 10122018-10122318 Caenorhabditis elegans
Exon102563   274   III: 10122652-10122925 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1128.5.1 10120781 10122925 1

1 Sequence

Length
1547

1 Sequence Ontology Term

Identifier Name Description
transcript