WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07C4.9a.1 Sequence Name  T07C4.9a.1
Length (nt)  1563   Chromosome Location  III: 10326057-10330422
Chromosome . Primary Identifier  III Chromosome Location . Start  10326057
Chromosome Location . End  10330422 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07C4.9a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003589 nex-2 T07C4.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07C4.9a T07C4.9a 1494   III: 10326116-10326631

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T07C4.9a.1 10326057 10330422 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon102989   575   III: 10326057-10326631 Caenorhabditis elegans
Exon102990   446   III: 10327557-10328002 Caenorhabditis elegans
Exon102993   390   III: 10329158-10329547 Caenorhabditis elegans
Exon102995   97   III: 10329696-10329792 Caenorhabditis elegans
Exon102997   55   III: 10330368-10330422 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T07C4.9a.1 10326057 10330422 -1

1 Sequence

Length
1563

1 Sequence Ontology Term

Identifier Name Description
transcript