WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:T07C4.1.1 Sequence Name  T07C4.1.1
Length (nt)  1630   Chromosome Location  III: 10355837-10357648
Chromosome . Primary Identifier  III Chromosome Location . Start  10355837
Chromosome Location . End  10357648 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07C4.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011559 umps-1 T07C4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07C4.1 T07C4.1 1494   III: 10355968-10356019

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T07C4.1.1 10355837 10357648 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon103072   183   III: 10355837-10356019 Caenorhabditis elegans
Exon103073   824   III: 10356072-10356895 Caenorhabditis elegans
Exon103074   450   III: 10356951-10357400 Caenorhabditis elegans
Exon103075   173   III: 10357476-10357648 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T07C4.1.1 10355837 10357648 -1

1 Sequence

Length
1630

1 Sequence Ontology Term

Identifier Name Description
transcript