WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C38H2.1b.1 Sequence Name  C38H2.1b.1
Length (nt)  2058   Chromosome Location  III: 10368766-10373054
Chromosome . Primary Identifier  III Chromosome Location . Start  10368766
Chromosome Location . End  10373054 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C38H2.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008018 tbc-8 C38H2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C38H2.1b C38H2.1b 2058   III: 10368766-10368882

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C38H2.1b.1 10368766 10373054 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon103081   117   III: 10368766-10368882 Caenorhabditis elegans
Exon103083   157   III: 10369382-10369538 Caenorhabditis elegans
Exon103085   354   III: 10369766-10370119 Caenorhabditis elegans
Exon103087   166   III: 10370325-10370490 Caenorhabditis elegans
Exon103089   54   III: 10370738-10370791 Caenorhabditis elegans
Exon103091   202   III: 10370840-10371041 Caenorhabditis elegans
Exon103093   168   III: 10371204-10371371 Caenorhabditis elegans
Exon103095   129   III: 10371461-10371589 Caenorhabditis elegans
Exon103097   143   III: 10371637-10371779 Caenorhabditis elegans
Exon103099   98   III: 10371826-10371923 Caenorhabditis elegans
Exon103101   110   III: 10371969-10372078 Caenorhabditis elegans
Exon103103   97   III: 10372302-10372398 Caenorhabditis elegans
Exon103105   171   III: 10372748-10372918 Caenorhabditis elegans
Exon103106   92   III: 10372963-10373054 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C38H2.1b.1 10368766 10373054 1

1 Sequence

Length
2058

1 Sequence Ontology Term

Identifier Name Description
transcript