WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T21C12.1d.1 Sequence Name  T21C12.1d.1
Length (nt)  2570   Chromosome Location  III: 10520762-10532705
Chromosome . Primary Identifier  III Chromosome Location . Start  10520762
Chromosome Location . End  10532705 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T21C12.1d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006784 unc-49 T21C12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T21C12.1d T21C12.1d 1428   III: 10520968-10521041

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T21C12.1d.1 10520762 10532705 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon103407   280   III: 10520762-10521041 Caenorhabditis elegans
Exon103417   87   III: 10522047-10522133 Caenorhabditis elegans
Exon103425   76   III: 10522722-10522797 Caenorhabditis elegans
Exon103433   242   III: 10522916-10523157 Caenorhabditis elegans
Exon103441   83   III: 10524243-10524325 Caenorhabditis elegans
Exon103472   150   III: 10527970-10528119 Caenorhabditis elegans
Exon103478   256   III: 10528370-10528625 Caenorhabditis elegans
Exon103484   160   III: 10528677-10528836 Caenorhabditis elegans
Exon103496   123   III: 10529432-10529554 Caenorhabditis elegans
Exon103502   91   III: 10529735-10529825 Caenorhabditis elegans
Exon103508   85   III: 10529873-10529957 Caenorhabditis elegans
Exon103516   153   III: 10530586-10530738 Caenorhabditis elegans
Exon103522   104   III: 10531229-10531332 Caenorhabditis elegans
Exon103528   286   III: 10531379-10531664 Caenorhabditis elegans
Exon103535   131   III: 10532209-10532339 Caenorhabditis elegans
Exon103547   263   III: 10532443-10532705 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T21C12.1d.1 10520762 10532705 1

1 Sequence

Length
2570

1 Sequence Ontology Term

Identifier Name Description
transcript