WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T21C12.1e.1 Sequence Name  T21C12.1e.1
Length (nt)  2581   Chromosome Location  III: 10520843-10532704
Chromosome . Primary Identifier  III Chromosome Location . Start  10520843
Chromosome Location . End  10532704 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T21C12.1e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006784 unc-49 T21C12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T21C12.1e T21C12.1e 1521   III: 10520968-10521041

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T21C12.1e.1 10520843 10532704 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon103410   199   III: 10520843-10521041 Caenorhabditis elegans
Exon103418   87   III: 10522047-10522133 Caenorhabditis elegans
Exon103426   76   III: 10522722-10522797 Caenorhabditis elegans
Exon103434   242   III: 10522916-10523157 Caenorhabditis elegans
Exon103442   83   III: 10524243-10524325 Caenorhabditis elegans
Exon103473   150   III: 10527970-10528119 Caenorhabditis elegans
Exon103479   256   III: 10528370-10528625 Caenorhabditis elegans
Exon103485   160   III: 10528677-10528836 Caenorhabditis elegans
Exon103488   57   III: 10528912-10528968 Caenorhabditis elegans
Exon103491   36   III: 10529338-10529373 Caenorhabditis elegans
Exon103497   123   III: 10529432-10529554 Caenorhabditis elegans
Exon103503   91   III: 10529735-10529825 Caenorhabditis elegans
Exon103509   85   III: 10529873-10529957 Caenorhabditis elegans
Exon103517   153   III: 10530586-10530738 Caenorhabditis elegans
Exon103523   104   III: 10531229-10531332 Caenorhabditis elegans
Exon103529   286   III: 10531379-10531664 Caenorhabditis elegans
Exon103536   131   III: 10532209-10532339 Caenorhabditis elegans
Exon103544   262   III: 10532443-10532704 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T21C12.1e.1 10520843 10532704 1

1 Sequence

Length
2581

1 Sequence Ontology Term

Identifier Name Description
transcript