WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T21C12.1k.1 Sequence Name  T21C12.1k.1
Length (nt)  1467   Chromosome Location  III: 10520968-10529961
Chromosome . Primary Identifier  III Chromosome Location . Start  10520968
Chromosome Location . End  10529961 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T21C12.1k.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006784 unc-49 T21C12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T21C12.1k T21C12.1k 1467   III: 10520968-10521041

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T21C12.1k.1 10520968 10529961 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon103413   74   III: 10520968-10521041 Caenorhabditis elegans
Exon103421   87   III: 10522047-10522133 Caenorhabditis elegans
Exon103429   76   III: 10522722-10522797 Caenorhabditis elegans
Exon103437   242   III: 10522916-10523157 Caenorhabditis elegans
Exon103445   83   III: 10524243-10524325 Caenorhabditis elegans
Exon103474   150   III: 10527970-10528119 Caenorhabditis elegans
Exon103480   256   III: 10528370-10528625 Caenorhabditis elegans
Exon103486   160   III: 10528677-10528836 Caenorhabditis elegans
Exon103492   36   III: 10529338-10529373 Caenorhabditis elegans
Exon103498   123   III: 10529432-10529554 Caenorhabditis elegans
Exon103504   91   III: 10529735-10529825 Caenorhabditis elegans
Exon103511   89   III: 10529873-10529961 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T21C12.1k.1 10520968 10529961 1

1 Sequence

Length
1467

1 Sequence Ontology Term

Identifier Name Description
transcript