WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39A1A.21c.1 Sequence Name  Y39A1A.21c.1
Length (nt)  353   Chromosome Location  III: 10700667-10701717
Chromosome . Primary Identifier  III Chromosome Location . Start  10700667
Chromosome Location . End  10701717 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39A1A.21c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012658 Y39A1A.21 Y39A1A.21 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39A1A.21c Y39A1A.21c 222   III: 10700792-10700845

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y39A1A.21c.1 10700667 10701717 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon103927   179   III: 10700667-10700845 Caenorhabditis elegans
Exon103933   174   III: 10701544-10701717 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y39A1A.21c.1 10700667 10701717 -1

1 Sequence

Length
353

1 Sequence Ontology Term

Identifier Name Description
transcript