WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39A1C.3.1 Sequence Name  Y39A1C.3.1
Length (nt)  1183   Chromosome Location  III: 10866946-10868703
Chromosome . Primary Identifier  III Chromosome Location . Start  10866946
Chromosome Location . End  10868703 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39A1C.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000475 cey-4 Y39A1C.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39A1C.3 Y39A1C.3 885   III: 10867160-10867379

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y39A1C.3.1 10866946 10868703 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon104276   434   III: 10866946-10867379 Caenorhabditis elegans
Exon104277   613   III: 10867909-10868521 Caenorhabditis elegans
Exon104278   136   III: 10868568-10868703 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y39A1C.3.1 10866946 10868703 -1

1 Sequence

Length
1183

1 Sequence Ontology Term

Identifier Name Description
transcript