WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y47D3B.9a Sequence Name  Y47D3B.9a
Length (nt)  1629   Chromosome Location  III: 11464171-11464294
Chromosome . Primary Identifier  III Chromosome Location . Start  11464171
Chromosome Location . End  11464294
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47D3B.9a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE53688 BED-2, isoform a 58.5 542 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00000451
WBRNAi00002037
WBRNAi00056776
WBRNAi00020706
WBRNAi00006414
WBRNAi00037171
WBRNAi00108540
WBRNAi00108615

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y47D3B.9a 11464171 11464294 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012943 bed-2 Y47D3B.9 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y47D3B.9a 11464171 11464294 -1
CDS:Y47D3B.9a 11464797 11465284 -1
CDS:Y47D3B.9a 11465809 11466093 -1
CDS:Y47D3B.9a 11468692 11468828 -1
CDS:Y47D3B.9a 11469846 11470107 -1
CDS:Y47D3B.9a 11470320 11470436 -1
CDS:Y47D3B.9a 11470590 11470805 -1

1 Sequence

Length
1629

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y47D3B.9a.1 Y47D3B.9a.1 2138   III: 11463665-11470808