WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y41C4A.4c.1 Sequence Name  Y41C4A.4c.1
Length (nt)  945   Chromosome Location  III: 11657767-11693554
Chromosome . Primary Identifier  III Chromosome Location . Start  11657767
Chromosome Location . End  11693554 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y41C4A.4c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000793 crh-1 Y41C4A.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y41C4A.4c Y41C4A.4c 945   III: 11657767-11657805

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y41C4A.4c.1 11657767 11693554 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon105894   39   III: 11657767-11657805 Caenorhabditis elegans
Exon105902   77   III: 11676421-11676497 Caenorhabditis elegans
Exon105908   94   III: 11685210-11685303 Caenorhabditis elegans
Exon105916   205   III: 11688132-11688336 Caenorhabditis elegans
Exon105923   216   III: 11691293-11691508 Caenorhabditis elegans
Exon105930   194   III: 11692481-11692674 Caenorhabditis elegans
Exon105936   120   III: 11693435-11693554 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y41C4A.4c.1 11657767 11693554 1

1 Sequence

Length
945

1 Sequence Ontology Term

Identifier Name Description
transcript