WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y75B8A.3.1 Sequence Name  Y75B8A.3.1
Length (nt)  3678   Chromosome Location  III: 12101745-12107541
Chromosome . Primary Identifier  III Chromosome Location . Start  12101745
Chromosome Location . End  12107541 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y75B8A.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013540 cest-12 Y75B8A.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y75B8A.3 Y75B8A.3 2553   III: 12101869-12102042

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y75B8A.3.1 12101745 12107541 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon106660   298   III: 12101745-12102042 Caenorhabditis elegans
Exon106661   272   III: 12102207-12102478 Caenorhabditis elegans
Exon106662   148   III: 12102527-12102674 Caenorhabditis elegans
Exon106663   1232   III: 12103142-12104373 Caenorhabditis elegans
Exon106664   349   III: 12104752-12105100 Caenorhabditis elegans
Exon106665   224   III: 12105246-12105469 Caenorhabditis elegans
Exon106666   1065   III: 12106340-12107404 Caenorhabditis elegans
Exon106667   90   III: 12107452-12107541 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y75B8A.3.1 12101745 12107541 -1

1 Sequence

Length
3678

1 Sequence Ontology Term

Identifier Name Description
transcript