WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y75B8A.16a Sequence Name  Y75B8A.16a
Length (nt)  1398   Chromosome Location  III: 12219060-12219176
Chromosome . Primary Identifier  III Chromosome Location . Start  12219060
Chromosome Location . End  12219176
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y75B8A.16a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE24667 GPHR-1, isoform a 53.6 465 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00058442
WBRNAi00058443
WBRNAi00058444
WBRNAi00006908
WBRNAi00007004
WBRNAi00007125

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y75B8A.16a 12219060 12219176 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013551 gphr-1 Y75B8A.16 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y75B8A.16a 12219060 12219176 1
CDS:Y75B8A.16a 12219230 12219333 1
CDS:Y75B8A.16a 12220391 12220930 1
CDS:Y75B8A.16a 12221784 12222216 1
CDS:Y75B8A.16a 12223631 12223834 1

1 Sequence

Length
1398

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y75B8A.16a.1 Y75B8A.16a.1 1511   III: 12219047-12223934