WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y75B8A.26.1 Sequence Name  Y75B8A.26.1
Length (nt)  4467   Chromosome Location  III: 12283133-12303184
Chromosome . Primary Identifier  III Chromosome Location . Start  12283133
Chromosome Location . End  12303184 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y75B8A.26.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003414 mrp-8 Y75B8A.26 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y75B8A.26 Y75B8A.26 4386   III: 12283208-12283322

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y75B8A.26.1 12283133 12303184 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

21 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon106873   190   III: 12283133-12283322 Caenorhabditis elegans
Exon106874   195   III: 12283371-12283565 Caenorhabditis elegans
Exon106875   267   III: 12284171-12284437 Caenorhabditis elegans
Exon106876   524   III: 12285173-12285696 Caenorhabditis elegans
Exon106877   273   III: 12286835-12287107 Caenorhabditis elegans
Exon106878   155   III: 12287153-12287307 Caenorhabditis elegans
Exon106879   555   III: 12288583-12289137 Caenorhabditis elegans
Exon106880   235   III: 12289309-12289543 Caenorhabditis elegans
Exon106881   303   III: 12291393-12291695 Caenorhabditis elegans
Exon106882   147   III: 12292596-12292742 Caenorhabditis elegans
Exon106883   306   III: 12293108-12293413 Caenorhabditis elegans
Exon106884   171   III: 12294596-12294766 Caenorhabditis elegans
Exon106885   198   III: 12294822-12295019 Caenorhabditis elegans
Exon106886   112   III: 12295622-12295733 Caenorhabditis elegans
Exon106887   121   III: 12295781-12295901 Caenorhabditis elegans
Exon106888   202   III: 12297618-12297819 Caenorhabditis elegans
Exon106889   102   III: 12297876-12297977 Caenorhabditis elegans
Exon106890   117   III: 12298203-12298319 Caenorhabditis elegans
Exon106891   108   III: 12301748-12301855 Caenorhabditis elegans
Exon106893   141   III: 12302489-12302629 Caenorhabditis elegans
Exon106894   45   III: 12303140-12303184 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y75B8A.26.1 12283133 12303184 -1

1 Sequence

Length
4467

1 Sequence Ontology Term

Identifier Name Description
transcript